Ayass Bioscience · Agentic Causal AI

The Bioinformatics
Help Companion

Autonomous biomarker discovery for multi-omics research — from a raw FASTQ file to a validated, FDA-grade causal target.

51 real questions · 16 themes · one causal engine

Explore the 51 questions Launch BiRAGAS →

DEG · pathways · prioritization

Causal confidence scored

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What it does

Capabilities map to real analysis modules in the product — language taken from the actual pipeline presets, not invented marketing stats.

DEG analysis

Identify differentially expressed genes and enriched pathways between phenotypes.

Pathway enrichment

Enrich and interpret pathway-level signals from ranked gene lists, including GSEA-style enrichment.

Gene prioritization

Rank and prioritize genes by biological significance and translational relevance.

Deconvolution

Estimate cell-type proportions and cell-state signatures from bulk transcriptomic profiles.

Cohort retrieval & harmonization

Retrieve and harmonize data from public and private sources into analysis-ready cohorts.

Causal & genetic layers

Directed reasoning (SIGNOR-style), GWAS association, and Mendelian-randomization workflows.

Single-cell analysis

Single-cell RNA-seq: clustering, cell types, markers, and states.

Perturbation analysis

Analyze expression perturbations using DepMap, L1000, and related integrated datasets.

How it works

A simple path from data to interpretable outputs — aligned with how the platform's analysis graph actually runs.

Bring your cohort

Upload study data or retrieve and harmonize cohorts from supported sources so analyses start from consistent inputs.

Plan & run analyses

The agentic workflow plans multi-step pipelines — DEG, pathways, prioritization, deconvolution, and related modules — then executes them as configured runs.

Review results

Inspect outputs, figures, and reports in the product workspace, then iterate on the next question without leaving the platform.

The 51 questions bioinformaticians actually ask

Every real question — from "where do I even start?" to "how do I produce FDA-grade causal evidence?" — with a plain-language answer and its illustration.

Who it's for

Whatever your seat at the bench or the desk — the companion meets you at your level.

From raw reads to a causal answer you can trust.

BiRAGAS answers the questions bioinformaticians actually ask — and tells you how confident it is in every answer.

Go to app.biragas.com → Talk to us